PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000186765
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 462aa    MW: 51524.3 Da    PI: 6.833
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000186765genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1683.1e-52171481128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                    + pGfrFhPtdeelv +yLk+kv++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ 
  MDP0000186765  17 MLPGFRFHPTDEELVGFYLKRKVQQRPLSI-ELIKQLDIYKFDPWDLPKLAASGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSe 111
                    579***************************.89***************8888899***************************************97 PP

            NAM  96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++ +glkk+Lvfykgra kg+ktdW+mhe+rl
  MDP0000186765 112 dacsSSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 148
                    77766777***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-5715182IPR003441NAC domain
PROSITE profilePS5100556.217182IPR003441NAC domain
PfamPF023652.1E-2519148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MDERSDNIEG EKMDEVMLPG FRFHPTDEEL VGFYLKRKVQ QRPLSIELIK QLDIYKFDPW  60
DLPKLAASGE KEWYFYCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EDACSSSKCI  120
GLKKSLVFYK GRAAKGVKTD WMMHEFRLPS LTDSLPPKRS SSFMDKTIPA NDSWAICRIF  180
KKTNSSNAHQ RALSNHSWVS ALPETNTFGD HMLGSKGAHN TTHQHHEFSS ESLTSKTNFS  240
GNNNDIQISS TTSNISPLDI YPNSYKPVNP LMMGCNVKLP YQYFPISSNF PSGSSDYFSN  300
PSFTFPSPLE TSSGPAAEKC TVDVSSFLLN MSSSMVGDYN GSNNVKGSSA ESTNFDFSTN  360
GGFSSTALPH HHEIMQGSNN NLGNVYDNIA GLIKNIQNVN SNVTEERDDH QWETSARSNI  420
GFPLMSSLPL PMDVGGGDAW KSSLTWESSP CPTEMSTTRC YT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B7e-531918719170NAC domain-containing protein 19
4dul_A7e-531918719170NAC domain-containing protein 19
1ut7_B7e-531918719170NO APICAL MERISTEM PROTEIN
1ut7_A7e-531918719170NO APICAL MERISTEM PROTEIN
1ut4_B7e-531918719170NO APICAL MERISTEM PROTEIN
1ut4_A7e-531918719170NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008390053.10.0PREDICTED: protein FEZ-like
SwissprotQ9ZVH06e-99FEZ_ARATH; Protein FEZ
TrEMBLM5Y2Y70.0M5Y2Y7_PRUPE; Uncharacterized protein
STRINGGLYMA02G11900.11e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20133490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.11e-100NAC family protein